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This is mostly condensed from HPF documentation; see https://wiki.mouseimaging.ca/download/attachments/7897100/HPF%20User%20Documentation.pptx?api=v2, https://ccm.sickkids.ca/?page_id=61, and https://wiki.ccm.sickkids.ca/doku.php.

Table of Contents

General outline

  • Transfer data onto /hpf/largeprojects/MICe.
  • Start a new qlogin session with sufficient walltime and memory to run Pydpiper.
  • Load modules.
  • Run your Pydpiper job as you would at MICe.

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