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  • minc-stuffs (formerly mice-minc-tools)

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Brief Description


Create a vector volume containing the displacements at each voxel specified by a transform (.xfm file).


Compute the volume of segmented structures given an atlas and Jacobian determinants.


Create a tag file from a transform.


Compute the linear part of a non-linear transform.


Multiply values in a file by the combined scale factor of a linear transform.


Blur a vector file.


Pretty pictures of deformation fields


Add normally distributed noise to a volume.

TFCEThreshold-free cluster enhancement
#minc_label_opsManipulate label (segmentation) files

Installation instructions


What every lab needs - a way to make their images look worse. add_noise_to_volume adds x percent normally distributed noise to an input volume. Needs R with the RMINC library installed.